File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/7f4956a65b678ef448a8961b77676c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yx7gt7hs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:58:01,829 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:58:02,683 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:58:02,857 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:58:03,936 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:58:04,005 - cnv_pipe.batch.run_model - INFO - Processing cluster 1526 with 198 probes
2026-06-05 20:58:04,388 - cnv_pipe.batch.run_model.cluster1526 - INFO - Child process started for cluster 1526 with 198 probes
2026-06-05 20:59:04,643 - cnv_pipe.batch.run_model.cluster1526 - INFO - Child process finished cluster 1526. Wrote cluster_1526_samples.csv and cluster_1526_params.csv
2026-06-05 20:59:04,644 - cnv_pipe.batch.run_model - INFO - Cluster 1526 finished in 60.64 seconds. Status: SUCCESS