File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/681cae9f1001c95baa5bf287f2c2ff/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i67afdbx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:21,464 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:22,278 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:22,456 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:23,429 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:23,500 - cnv_pipe.batch.run_model - INFO - Processing cluster 1290 with 196 probes
2026-06-05 20:57:23,973 - cnv_pipe.batch.run_model.cluster1290 - INFO - Child process started for cluster 1290 with 196 probes
2026-06-05 20:58:23,041 - cnv_pipe.batch.run_model.cluster1290 - INFO - Child process finished cluster 1290. Wrote cluster_1290_samples.csv and cluster_1290_params.csv
2026-06-05 20:58:23,042 - cnv_pipe.batch.run_model - INFO - Cluster 1290 finished in 59.54 seconds. Status: SUCCESS