File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/15c3ea0fa7e3cd85aa2e90217e0b78/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fjnnm0d8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:44,431 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:45,339 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:45,519 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:46,535 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:46,706 - cnv_pipe.batch.run_model - INFO - Processing cluster 1426 with 183 probes
2026-06-05 20:57:47,098 - cnv_pipe.batch.run_model.cluster1426 - INFO - Child process started for cluster 1426 with 183 probes
2026-06-05 20:58:46,109 - cnv_pipe.batch.run_model.cluster1426 - INFO - Child process finished cluster 1426. Wrote cluster_1426_samples.csv and cluster_1426_params.csv
2026-06-05 20:58:46,110 - cnv_pipe.batch.run_model - INFO - Cluster 1426 finished in 59.40 seconds. Status: SUCCESS