mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fieyms34 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:54:04,505 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:54:05,292 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:54:05,457 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:54:06,359 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:54:06,518 - cnv_pipe.batch.run_model - INFO - Processing cluster 118 with 165 probes
2026-06-05 20:54:06,889 - cnv_pipe.batch.run_model.cluster118 - INFO - Child process started for cluster 118 with 165 probes
2026-06-05 20:54:55,683 - cnv_pipe.batch.run_model.cluster118 - INFO - Child process finished cluster 118. Wrote cluster_118_samples.csv and cluster_118_params.csv
2026-06-05 20:54:55,685 - cnv_pipe.batch.run_model - INFO - Cluster 118 finished in 49.17 seconds. Status: SUCCESS