File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/3117cb9fd5c113adc50659bedb5b7a/.command.err
Size
68.3 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr10_74133927-74134264.bed)
Attempt

Content

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[2026-06-05T20:51:54.602166Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:54.609165Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:54.609189Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:54.609194Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:54.609199Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXZMAC02'
[2026-06-05T20:51:54.609203Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:54.609208Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:54.609212Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:54.609216Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:51:54.609220Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:54.609223Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:54.609227Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:54.609230Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:54.609234Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:54.609968Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:54.610023Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:54.616403Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:54.616937Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:54.617076Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:54.617238Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:54.617424Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.618297Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.618745Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.618889Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.618996Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.619148Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.619264Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.619629Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.619883Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.620300Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.621575Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622010Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:54.622169Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622299Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622576Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622701Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622815Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622878Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.622987Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623082Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623277Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623349Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623464Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623534Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623647Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.623716Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624206Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624292Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624412Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624482Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624602Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624680Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624797Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624861Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.624977Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625041Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625148Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625210Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625444Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625747Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625859Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.625948Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626058Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626121Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626225Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626286Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626399Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626461Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626621Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.626686Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627210Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627495Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627653Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627724Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627840Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.627905Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628019Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628086Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628195Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628257Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628369Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628429Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.628643Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629119Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629228Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629298Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629407Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629473Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629584Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629648Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629756Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629820Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629927Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.629988Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645064Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645504Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645580Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645747Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645816Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645904Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.645966Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.646078Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.646149Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:54.646193Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:54.648369Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.649070Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.649918Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.651271Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.651782Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-06-05T20:51:54.652206Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.652755Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.654609Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.655159Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.656751Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-06-05T20:51:54.657353Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.657598Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-06-05T20:51:54.663338Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:54.665531Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-06-05T20:51:54.668440Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-06-05T20:51:54.668797Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:54.669323Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-06-05T20:51:54.772781Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.772849Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.773557Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.773833Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.779003Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:54.780532Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:54.891985Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.892802Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.895885Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-06-05T20:51:55.207971Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.208806Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.211953Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-06-05T20:51:55.473750Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.474609Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477942Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-06-05T20:51:55.589369Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.590199Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.593006Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:55.654399Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.654471Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.655134Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.655485Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.658929Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:55.660217Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-06-05T20:51:55.970731Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.971580Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.974893Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-06-05T20:51:55.987779Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.988500Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.991363Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-06-05T20:51:56.604588Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.605454Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.608431Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:56.770641Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.771504Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.774548Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:56.836573Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.836644Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.837472Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.837868Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.841724Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-06-05T20:51:56.842632Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-06-05T20:51:56.902698Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.902805Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.903567Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.905473Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.907679Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:56.909220Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:56.938466Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.938557Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.939301Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.939907Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.942645Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-06-05T20:51:56.943484Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-06-05T20:51:57.004039Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.004110Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.004789Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.005407Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.008145Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:57.009428Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-06-05T20:51:57.040177Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.040258Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.040285Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.040960Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.041444Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.043242Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.043781Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-06-05T20:51:57.046339Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-06-05T20:51:57.047266Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-06-05T20:51:57.075332Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.076010Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.078497Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-06-05T20:51:57.109136Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.109825Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.112492Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-06-05T20:51:57.141941Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.142674Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.145404Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-06-05T20:51:57.257067Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.257797Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.260650Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-06-05T20:51:57.572519Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.573242Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.575920Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:57.637817Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.638583Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.641736Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-06-05T20:51:57.702990Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.703664Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.706984Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:57.919522Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.920275Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.923079Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-06-05T20:51:58.134965Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.135715Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.138395Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-06-05T20:51:58.144559Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.145186Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.147743Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-06-05T20:51:58.177463Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.177582Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.178222Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.178729Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.182132Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:51:58.184297Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-06-05T20:51:58.243384Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.244141Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.247325Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:51:58.260339Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.260958Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.263861Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-06-05T20:51:58.276998Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.277606Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.280236Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:58.341922Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.342633Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.345491Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:58.375017Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.375665Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.378312Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:51:58.439885Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.440520Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.443483Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:58.655320Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.655974Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.658897Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-06-05T20:51:58.721349Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.721441Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.721993Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.722532Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.725865Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:51:58.726635Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-06-05T20:51:58.756521Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.757070Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.760223Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-06-05T20:51:58.773225Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.773797Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.776418Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-06-05T20:51:58.806925Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.807538Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.810363Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-06-05T20:51:58.824552Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.825078Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.827911Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-06-05T20:51:58.857128Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.857900Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.859898Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.860518Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.860984Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:58.863727Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:51:58.925345Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.925431Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.925953Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.926478Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.929783Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-06-05T20:51:58.931032Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-06-05T20:51:58.958599Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.959153Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.961823Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-06-05T20:51:58.991302Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.991847Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.993852Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.994566Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.996140Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-06-05T20:51:58.997334Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-06-05T20:51:59.026810Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.026869Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.027315Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.029151Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.030227Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-06-05T20:51:59.032628Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:51:59.062039Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.062546Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.065317Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-06-05T20:51:59.126902Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.291204Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.291705Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.294712Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-06-05T20:51:59.355859Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.355941Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.356411Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.359272Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:51:59.388496Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.452583Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.453045Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.455816Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:51:59.486070Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.800649Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.800717Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.801123Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.802904Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.803674Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-06-05T20:51:59.805929Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-06-05T20:51:59.867462Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.867530Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.931422Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.931839Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.934588Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:59.963595Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.230500Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.230973Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.234114Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:52:01.295094Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.295388Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.295541Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.296191Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.296785Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.300505Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:01.302081Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:01.303148Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:01.364988Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.365074Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.365097Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.365341Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.367334Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.368952Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:01.370089Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:01.399863Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.399946Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.400185Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.402998Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:01.433276Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:05.204565Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:13.497635Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:13.497635Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] 
[2026-06-05T20:52:13.497635Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:13.497685Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] 
[2026-06-05T20:52:13.497696Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:13.497703Z] [nf-b13117cb9fd5c113adc50659bedb5b7a-07ebd-cdcvx] [580_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec