File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/5d574e2465485da55aa30ee5c5bb8b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p895x4md because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:26,710 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:27,594 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:27,784 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:28,775 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:28,925 - cnv_pipe.batch.run_model - INFO - Processing cluster 1317 with 187 probes
2026-06-05 20:57:29,314 - cnv_pipe.batch.run_model.cluster1317 - INFO - Child process started for cluster 1317 with 187 probes
2026-06-05 20:58:24,853 - cnv_pipe.batch.run_model.cluster1317 - INFO - Child process finished cluster 1317. Wrote cluster_1317_samples.csv and cluster_1317_params.csv
2026-06-05 20:58:24,854 - cnv_pipe.batch.run_model - INFO - Cluster 1317 finished in 55.93 seconds. Status: SUCCESS