File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/ff668ecc50121f384bd5e2b337470c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2lt5elkc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:55,589 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:56,909 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:57,190 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:58,886 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:58,993 - cnv_pipe.batch.run_model - INFO - Processing cluster 1466 with 198 probes
2026-06-05 20:57:59,723 - cnv_pipe.batch.run_model.cluster1466 - INFO - Child process started for cluster 1466 with 198 probes
2026-06-05 20:59:36,620 - cnv_pipe.batch.run_model.cluster1466 - INFO - Child process finished cluster 1466. Wrote cluster_1466_samples.csv and cluster_1466_params.csv
2026-06-05 20:59:36,622 - cnv_pipe.batch.run_model - INFO - Cluster 1466 finished in 97.63 seconds. Status: SUCCESS