File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/39570e201b05842a27c7e29e14da45/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6k_cl0nr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:44,189 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:44,977 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:45,142 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:46,194 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:46,353 - cnv_pipe.batch.run_model - INFO - Processing cluster 1380 with 157 probes
2026-06-05 20:57:46,727 - cnv_pipe.batch.run_model.cluster1380 - INFO - Child process started for cluster 1380 with 157 probes
2026-06-05 20:58:35,586 - cnv_pipe.batch.run_model.cluster1380 - INFO - Child process finished cluster 1380. Wrote cluster_1380_samples.csv and cluster_1380_params.csv
2026-06-05 20:58:35,587 - cnv_pipe.batch.run_model - INFO - Cluster 1380 finished in 49.23 seconds. Status: SUCCESS