File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/546005af2395406a2048f01eced904/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_4ptm9_6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:28,930 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:29,765 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:29,932 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:31,040 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:56:31,117 - cnv_pipe.batch.run_model - INFO - Processing cluster 971 with 188 probes
2026-06-05 20:56:31,509 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process started for cluster 971 with 188 probes
2026-06-05 20:57:28,064 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process finished cluster 971. Wrote cluster_971_samples.csv and cluster_971_params.csv
2026-06-05 20:57:28,065 - cnv_pipe.batch.run_model - INFO - Cluster 971 finished in 56.95 seconds. Status: SUCCESS