mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-akc28p68 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:31,048 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:32,009 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:32,203 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:33,373 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:33,456 - cnv_pipe.batch.run_model - INFO - Processing cluster 621 with 199 probes
2026-06-05 20:55:33,918 - cnv_pipe.batch.run_model.cluster621 - INFO - Child process started for cluster 621 with 199 probes
2026-06-05 20:56:43,600 - cnv_pipe.batch.run_model.cluster621 - INFO - Child process finished cluster 621. Wrote cluster_621_samples.csv and cluster_621_params.csv
2026-06-05 20:56:43,602 - cnv_pipe.batch.run_model - INFO - Cluster 621 finished in 70.15 seconds. Status: SUCCESS