File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/96dfb02768464bcb6034f565be0bf6/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

View in new tab 
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXsRMBC0/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXsRMBC0/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXsRMBC0/chr6_138229684-138229952.bed.gz.tbi
[2026-06-05T20:51:55.452945Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:55.461962Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:55.461996Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:55.462003Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:55.462008Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXsRMBC0'
[2026-06-05T20:51:55.462012Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:55.462018Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:55.462021Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:55.462025Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T20:51:55.462029Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:55.462032Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:55.462035Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:55.462039Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:55.462043Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:55.462565Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:55.462669Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:55.468679Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:55.469571Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:55.469813Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:55.470089Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:55.470420Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.470985Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471077Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471149Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471265Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471332Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471602Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.472082Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.472223Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.472588Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.472721Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.473510Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.473885Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.476248Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.476634Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:55.476865Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477101Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477368Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477485Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477548Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477731Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477800Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477915Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.477984Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478094Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478157Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478306Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478498Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478914Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.478984Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479095Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479163Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479286Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479349Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479463Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479527Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479637Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479706Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479821Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.479902Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.480286Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.480705Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.480825Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.480890Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.480997Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481062Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481174Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481288Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481405Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481472Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481585Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481651Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.481819Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482020Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482548Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482616Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482728Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482792Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482899Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.482961Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483075Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483140Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483249Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483314Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483421Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483487Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.483885Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484380Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484499Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484564Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484680Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484742Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484847Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.484913Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.486500Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487089Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487219Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487286Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487394Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487457Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487566Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487626Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487736Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487796Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487903Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.487969Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.488168Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.488777Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.488895Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.488960Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489071Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489140Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489243Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489311Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489424Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489485Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489797Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.489944Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.490827Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.490901Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491064Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491130Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491242Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491306Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491414Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491481Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491588Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491650Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491761Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.491923Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.494395Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.495191Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.495454Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.495523Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.509169Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.509778Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.509929Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.510030Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.511083Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.511337Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.511508Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.511766Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.511858Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.512314Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.512774Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.513166Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.514000Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.514312Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:55.514803Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:55.515872Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.517123Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.518304Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.521151Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T20:51:55.521970Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.526348Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T20:51:55.529599Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T20:51:55.533143Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T20:51:55.536544Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T20:51:55.542808Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T20:51:55.543942Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T20:51:55.546820Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T20:51:55.710948Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.711997Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.716016Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T20:51:56.529130Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.530307Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.533557Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T20:51:56.795495Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.795599Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.796751Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.797087Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.801357Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T20:51:56.803039Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T20:51:56.830233Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.831447Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.835015Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T20:51:56.863975Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.865134Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.868521Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T20:51:56.869024Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.870020Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.873496Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T20:51:56.902401Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.903474Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.907785Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T20:51:57.017981Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.018085Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.019132Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.019561Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.022887Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T20:51:57.023906Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T20:51:57.084141Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.084253Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.084284Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.085263Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.085974Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.087931Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.089045Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T20:51:57.091836Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T20:51:57.093006Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T20:51:57.152508Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.153522Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.156326Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T20:51:57.217613Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.218641Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.221725Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T20:51:57.583786Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.584924Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.588405Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T20:51:57.649694Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.650740Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.654300Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T20:51:58.016270Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.017398Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.021157Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T20:51:58.081986Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.082091Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.083066Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.083395Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.087510Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T20:51:58.088988Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T20:51:58.148470Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.148557Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.149539Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.149883Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.154237Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T20:51:58.155586Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T20:51:58.217087Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.217167Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.218175Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.218512Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.222353Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T20:51:58.223718Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T20:51:58.283137Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.284069Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.287647Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T20:51:58.348353Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.349349Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.352301Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T20:51:58.413867Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.414865Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.418425Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T20:51:58.479364Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.479443Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.479482Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.480439Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.480835Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.481067Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.484915Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T20:51:58.487846Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T20:51:58.498759Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.499682Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.502933Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T20:51:58.518644Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T20:51:58.532481Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.533547Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.533876Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.535617Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.538913Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T20:51:58.539776Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T20:51:58.553489Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.554367Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.558007Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T20:51:58.586450Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.586527Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.587418Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.587771Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.592201Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T20:51:58.593010Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T20:51:58.652346Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.653271Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.656255Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T20:51:58.717709Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.718618Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.721720Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T20:51:58.783061Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.783999Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.787042Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T20:51:58.848400Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.848502Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.849421Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.849814Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.853339Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T20:51:58.854349Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:51:58.914366Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.914457Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.915356Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.915718Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.919581Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:51:58.921118Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T20:51:58.980582Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.981527Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.984770Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T20:51:59.045812Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.045931Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.046907Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.047541Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.051664Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T20:51:59.052179Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.052912Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T20:51:59.053448Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.057271Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T20:51:59.117721Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.117819Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.117840Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.118701Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.119200Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.119622Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.124596Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T20:51:59.127028Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T20:51:59.128871Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T20:51:59.185543Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.185627Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.186550Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.187318Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.188095Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.195057Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T20:51:59.196318Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.196654Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T20:51:59.200268Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T20:51:59.261232Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.261343Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.262282Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.262958Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.267468Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T20:51:59.268331Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T20:51:59.297908Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.298830Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.302374Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T20:51:59.303395Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.304117Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.308064Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T20:51:59.368978Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.369869Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.373855Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T20:51:59.485151Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.486082Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.489740Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T20:51:59.551099Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.552029Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.556573Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T20:51:59.617219Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.618132Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.621797Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T20:51:59.683146Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.684073Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.688073Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T20:51:59.748667Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.749507Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.753079Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T20:51:59.765740Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.766585Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.770671Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T20:51:59.799718Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.800599Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.804861Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T20:51:59.833772Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.834551Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.838030Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T20:51:59.842930Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.843658Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.847166Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T20:51:59.876328Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.876412Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.876448Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.877336Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.877905Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.878303Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.882444Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T20:51:59.883303Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.887093Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T20:51:59.887867Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T20:51:59.888488Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.891555Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T20:51:59.920705Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.921437Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.925050Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T20:52:00.186764Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.187638Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.190933Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T20:52:00.252017Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.252885Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.256933Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T20:52:00.367888Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.368770Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.372085Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T20:52:00.433299Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.434414Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.438047Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T20:52:00.499095Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.499184Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.499864Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.500255Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.504651Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T20:52:00.505356Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T20:52:00.565098Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.565902Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.569164Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T20:52:00.730849Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.731685Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.735456Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T20:52:00.946781Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.947607Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.951282Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T20:52:01.012633Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.013453Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.017040Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T20:52:01.078364Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.079134Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.082697Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T20:52:01.143894Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.144722Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.147914Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T20:52:01.209542Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.210319Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.214153Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T20:52:01.325294Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.326081Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.329733Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T20:52:01.391057Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.391814Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.395189Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T20:52:01.456483Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.457224Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.460419Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T20:52:01.521824Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.522577Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.525809Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T20:52:01.587122Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.587806Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.591126Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T20:52:01.652321Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.653080Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.656303Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T20:52:01.717700Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.717794Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.718490Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.718783Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.722102Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T20:52:01.723612Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T20:52:01.783593Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.783703Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.784402Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.784746Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.788608Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T20:52:01.789817Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T20:52:01.849787Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.849885Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.850517Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.850841Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.854436Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T20:52:01.887970Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T20:52:01.915562Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.915641Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.916327Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.919993Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T20:52:01.981114Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.981828Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.985295Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T20:52:02.046546Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.361793Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.362426Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.365965Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T20:52:02.427144Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.459388Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.459976Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.463435Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T20:52:02.524622Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.639066Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.639631Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.642671Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T20:52:02.704072Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.768558Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.769145Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.772210Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T20:52:02.833195Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.298446Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.299605Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.299981Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.302260Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.302787Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T20:52:03.305377Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T20:52:03.334602Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.334693Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.335023Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.335178Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.335504Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.336203Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.338783Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:03.341585Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:03.342206Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:03.370301Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.370609Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.373399Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:03.374540Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.374973Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.375128Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.378191Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:03.407264Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.407345Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.407564Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.410476Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:03.439673Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.110431Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:14.350434Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:14.350434Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] 
[2026-06-05T20:52:14.350434Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:14.350497Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] 
[2026-06-05T20:52:14.350505Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:14.350512Z] [nf-d096dfb02768464bcb6034f565be0bf6-a8d43-hkdxw] [598_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec