mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f8kajbtd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:16,640 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:17,464 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:17,636 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:18,651 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:18,811 - cnv_pipe.batch.run_model - INFO - Processing cluster 542 with 194 probes
2026-06-05 20:55:19,200 - cnv_pipe.batch.run_model.cluster542 - INFO - Child process started for cluster 542 with 194 probes
2026-06-05 20:56:18,709 - cnv_pipe.batch.run_model.cluster542 - INFO - Child process finished cluster 542. Wrote cluster_542_samples.csv and cluster_542_params.csv
2026-06-05 20:56:18,710 - cnv_pipe.batch.run_model - INFO - Cluster 542 finished in 59.90 seconds. Status: SUCCESS