mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rc8p2iff because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:53,102 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:53,994 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:54,173 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:55,185 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:56:55,407 - cnv_pipe.batch.run_model - INFO - Processing cluster 1113 with 165 probes
2026-06-05 20:56:55,825 - cnv_pipe.batch.run_model.cluster1113 - INFO - Child process started for cluster 1113 with 165 probes
2026-06-05 20:57:49,055 - cnv_pipe.batch.run_model.cluster1113 - INFO - Child process finished cluster 1113. Wrote cluster_1113_samples.csv and cluster_1113_params.csv
2026-06-05 20:57:49,057 - cnv_pipe.batch.run_model - INFO - Cluster 1113 finished in 53.65 seconds. Status: SUCCESS