File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/6279f3136476df377aa557cc1b73d8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xbld1_8w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:47,778 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:48,606 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:48,771 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:49,760 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:56:49,914 - cnv_pipe.batch.run_model - INFO - Processing cluster 1083 with 134 probes
2026-06-05 20:56:50,306 - cnv_pipe.batch.run_model.cluster1083 - INFO - Child process started for cluster 1083 with 134 probes
2026-06-05 20:57:32,271 - cnv_pipe.batch.run_model.cluster1083 - INFO - Child process finished cluster 1083. Wrote cluster_1083_samples.csv and cluster_1083_params.csv
2026-06-05 20:57:32,272 - cnv_pipe.batch.run_model - INFO - Cluster 1083 finished in 42.36 seconds. Status: SUCCESS