File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/a1a773a570113f5482bd41233cb455/.command.err
Size
87.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr12_102480219-102480663.bed)
Attempt

Content

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[2026-06-05T20:51:53.114912Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:53.117666Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:53.117676Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:53.117682Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:53.117687Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX8PKGWu'
[2026-06-05T20:51:53.117691Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:53.117696Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:53.117700Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:53.117703Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:51:53.117707Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:53.117711Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:53.117716Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:53.117723Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:53.117727Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:53.118491Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:53.118563Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:53.124520Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:53.125309Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:53.125680Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:53.125917Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:53.126112Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.127169Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.127473Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.127593Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.127702Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.127832Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.128039Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.128403Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.128623Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.128959Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.129081Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.129330Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.129408Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.131242Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.131598Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:53.131954Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132137Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132213Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132336Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132399Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132595Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132659Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.132788Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133011Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133481Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133555Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133679Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133745Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133856Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.133921Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134031Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134103Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134211Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134271Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134378Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134486Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.134932Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.135039Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.135494Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.135890Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136004Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136063Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136172Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136238Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136345Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136408Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136521Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136637Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136750Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136813Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.136964Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137379Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137489Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137551Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137658Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137718Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137828Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.137904Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138039Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138103Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138211Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138271Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138379Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.138469Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.139246Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.139395Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.139603Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.140080Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.140310Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.140902Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.141384Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.141451Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.141558Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.141619Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.142986Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.143571Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.143720Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.143797Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.143911Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.143979Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144097Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144159Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144275Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144337Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144446Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144509Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.144726Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145510Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145618Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145683Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145792Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145854Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.145962Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.146023Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.146133Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.146196Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.146304Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.146362Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160417Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160510Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160580Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160815Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160884Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.160983Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.161046Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.161170Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.161237Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:53.161286Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:53.161465Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.162372Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.162741Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.163262Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.163671Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.165843Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.166281Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T20:51:53.167057Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.167712Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.168379Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.172698Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T20:51:53.174061Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T20:51:53.176448Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T20:51:53.180396Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T20:51:53.182191Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T20:51:53.183494Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:53.184924Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:53.284351Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.284416Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.284437Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.285213Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.285714Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.286310Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.289075Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T20:51:53.290743Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T20:51:53.292023Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T20:51:53.401768Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.402666Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.406007Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T20:51:53.419020Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.419909Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.423081Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:53.785699Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.786818Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.789926Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:53.851323Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.852344Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.855164Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T20:51:53.885580Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.886556Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.889249Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T20:51:53.950910Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.951922Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:53.955195Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T20:51:54.016527Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.017569Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.020600Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:54.332583Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.333691Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.336869Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T20:51:54.548552Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.549588Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.552600Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T20:51:54.565842Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.566839Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.569446Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T20:51:54.570692Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.571566Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.574213Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T20:51:54.587580Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.588539Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.591694Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:51:54.652893Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.653847Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.656709Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T20:51:54.718187Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.719181Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.721795Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:51:54.751371Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.752351Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.754996Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T20:51:54.966872Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.967896Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:54.970923Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T20:51:55.032438Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.033376Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.036263Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T20:51:55.097739Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.098744Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.101867Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T20:51:55.163194Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.164150Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.167135Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T20:51:55.228572Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.228655Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.229509Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.230057Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.233108Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T20:51:55.234542Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T20:51:55.264111Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.265040Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.267437Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.268489Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.268634Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T20:51:55.271009Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T20:51:55.300915Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.300999Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.301848Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.303775Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.304698Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T20:51:55.307037Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T20:51:55.368357Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.368430Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.369311Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.369943Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.373113Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T20:51:55.374406Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T20:51:55.405333Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.406246Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.409065Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:55.470626Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.471591Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.474670Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T20:51:55.586281Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.587177Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.590195Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:55.651684Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.652635Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.655988Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:55.684791Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.685681Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.689186Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T20:51:55.717852Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.718827Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.721987Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T20:51:55.722696Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.723441Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.726623Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T20:51:55.755629Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.756451Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.759353Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:51:55.820676Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.821548Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.824819Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:51:55.885843Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.886752Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:55.889747Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T20:51:56.201518Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.202365Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.205371Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T20:51:56.267734Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.268627Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.271876Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:56.300750Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.301586Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.305129Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T20:51:56.416352Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.417214Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.420284Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T20:51:56.450766Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.451591Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.454869Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T20:51:56.484001Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484870Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487827Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T20:51:56.599514Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.600375Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.604084Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:56.665381Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.666277Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.669833Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:56.698767Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.699591Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.702502Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:56.731879Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.732962Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.735063Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.735903Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T20:51:56.736194Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.739359Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T20:51:56.768489Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.769269Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.772488Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T20:51:56.801568Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.802326Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.805248Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T20:51:56.806365Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.807032Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.810187Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T20:51:56.871064Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.871888Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.875401Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:56.986679Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.987491Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.991039Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T20:51:57.352503Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.353227Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.356443Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T20:51:57.417558Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.417634Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.418451Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.420569Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.422390Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T20:51:57.423845Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T20:51:57.453157Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.453250Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.454159Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.454576Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.455206Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.458977Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.459191Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T20:51:57.462224Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T20:51:57.463380Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T20:51:57.523575Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.524364Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.527528Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T20:51:57.557784Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.558553Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.561448Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T20:51:57.590758Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.591451Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.594872Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T20:51:57.599621Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.600283Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.603584Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T20:51:57.632669Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.633351Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.637301Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T20:51:57.998797Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.999539Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.002831Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:58.064142Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.064894Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.067868Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:58.129211Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.129830Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.133249Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T20:51:58.194505Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.195240Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.198563Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T20:51:58.259559Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.260347Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.263693Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T20:51:58.324618Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.325371Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.328830Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T20:51:58.640770Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.640842Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.641490Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.642003Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.645801Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T20:51:58.646642Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:58.708152Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.708815Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.712089Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.712400Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T20:51:58.712996Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.715839Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T20:51:58.746207Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.746293Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.746872Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.747263Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.750713Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:58.751951Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T20:51:58.811578Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.811670Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.811706Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.812282Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.812866Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.814805Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.815528Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T20:51:58.818371Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:58.820248Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:51:58.879415Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.879517Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.879542Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.880099Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.880639Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.884120Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:51:58.885243Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T20:51:58.915482Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.917078Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.381991Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.382524Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.386158Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:59.447028Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.611263Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.611740Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.614960Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T20:51:59.644162Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.908833Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.909372Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.912121Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T20:51:59.973797Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.238292Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.238816Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.241729Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T20:52:00.303093Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.467381Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.467925Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.471006Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T20:52:00.500220Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.500585Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.500734Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.501357Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.501869Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.507096Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:00.507306Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:00.533633Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:00.535940Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.536000Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.536380Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.536672Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.538593Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.540800Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:00.541826Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:00.571355Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571432Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.571678Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.574472Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:00.604200Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.724668Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:12.007742Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:12.007742Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] 
[2026-06-05T20:52:12.007742Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:12.007799Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] 
[2026-06-05T20:52:12.007807Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:12.007815Z] [nf-d0a1a773a570113f5482bd41233cb455-739e7-phxlv] [590_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec