File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/9ecf48123c7935a7f5be8a8e93660a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_0zsu80e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:39,056 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:39,918 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:40,097 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:41,059 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:41,149 - cnv_pipe.batch.run_model - INFO - Processing cluster 1050 with 140 probes
2026-06-05 20:57:41,643 - cnv_pipe.batch.run_model.cluster1050 - INFO - Child process started for cluster 1050 with 140 probes
2026-06-05 20:58:26,453 - cnv_pipe.batch.run_model.cluster1050 - INFO - Child process finished cluster 1050. Wrote cluster_1050_samples.csv and cluster_1050_params.csv
2026-06-05 20:58:26,454 - cnv_pipe.batch.run_model - INFO - Cluster 1050 finished in 45.31 seconds. Status: SUCCESS