mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pqy95kih because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:24,093 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:24,890 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:25,060 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:25,976 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:26,167 - cnv_pipe.batch.run_model - INFO - Processing cluster 478 with 199 probes
2026-06-05 20:55:26,551 - cnv_pipe.batch.run_model.cluster478 - INFO - Child process started for cluster 478 with 199 probes
2026-06-05 20:56:24,508 - cnv_pipe.batch.run_model.cluster478 - INFO - Child process finished cluster 478. Wrote cluster_478_samples.csv and cluster_478_params.csv
2026-06-05 20:56:24,509 - cnv_pipe.batch.run_model - INFO - Cluster 478 finished in 58.34 seconds. Status: SUCCESS