File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/aa9c2ff522d58f3333f9eaa25b82a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d1owyn32 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:05,302 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:06,219 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:06,387 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:07,322 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:07,398 - cnv_pipe.batch.run_model - INFO - Processing cluster 1188 with 186 probes
2026-06-05 20:57:07,876 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process started for cluster 1188 with 186 probes
2026-06-05 20:58:04,718 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process finished cluster 1188. Wrote cluster_1188_samples.csv and cluster_1188_params.csv
2026-06-05 20:58:04,719 - cnv_pipe.batch.run_model - INFO - Cluster 1188 finished in 57.32 seconds. Status: SUCCESS