mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0bhu75fw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:46,294 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:47,171 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:47,345 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:48,358 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:48,552 - cnv_pipe.batch.run_model - INFO - Processing cluster 636 with 198 probes
2026-06-05 20:55:48,933 - cnv_pipe.batch.run_model.cluster636 - INFO - Child process started for cluster 636 with 198 probes
2026-06-05 20:56:50,624 - cnv_pipe.batch.run_model.cluster636 - INFO - Child process finished cluster 636. Wrote cluster_636_samples.csv and cluster_636_params.csv
2026-06-05 20:56:50,626 - cnv_pipe.batch.run_model - INFO - Cluster 636 finished in 62.07 seconds. Status: SUCCESS