[2026-06-05T20:51:57.713602Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:57.714715Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:57.714744Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:57.714751Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:57.714755Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCNDktv'
[2026-06-05T20:51:57.714760Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:57.714765Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:57.714769Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:57.714773Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] memMb: 1547923
[2026-06-05T20:51:57.714777Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:57.714781Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:57.714784Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:57.714788Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:57.714792Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:57.715663Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:57.715994Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:57.721811Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:57.722596Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:57.722880Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:57.723568Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:57.723667Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.725403Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.725811Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.726209Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.726385Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.726702Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.726889Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.728993Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.729574Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.729865Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:57.730021Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730102Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730230Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730298Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730415Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730492Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.730857Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731032Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731147Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731210Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731393Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731465Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731579Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731648Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731761Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731824Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.731943Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732012Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732521Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732630Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732748Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732824Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.732939Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733004Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733118Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733183Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733298Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733373Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733665Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.733999Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734114Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734177Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734288Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734355Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734465Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734525Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734642Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734703Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734877Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.734946Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.735073Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.735405Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.735781Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.735844Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.735953Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736013Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736125Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736190Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736299Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736361Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736475Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736535Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736651Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736712Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.736847Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.737054Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.737371Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.737990Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.738605Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.738674Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.738787Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.738854Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.738964Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.739028Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.740888Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.741167Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.741946Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.742193Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.742830Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.742918Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743050Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743111Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743223Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743289Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743397Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743465Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743574Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743645Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743753Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.743952Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.744870Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.744982Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745110Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745181Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745301Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745366Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745485Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.745551Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.761889Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.762491Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.762760Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.763447Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.764244Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.764369Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.764944Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.765315Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.765790Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.766086Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.766355Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.766667Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.767667Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.767847Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.768689Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.770208Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.770984Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.771937Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:57.780626Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T20:51:57.785074Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T20:51:57.785819Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:57.787911Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T20:51:57.794765Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T20:51:57.795552Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T20:51:57.795728Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:57.795978Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:57.796284Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T20:51:57.911605Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.912716Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.915815Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T20:51:58.528683Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.529920Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.533602Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T20:51:58.595054Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.596218Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.599077Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T20:51:59.111851Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.112991Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.116134Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:51:59.177442Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.178586Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.181480Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T20:51:59.186427Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.187388Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.190358Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T20:51:59.251886Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.253025Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.255717Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T20:51:59.417773Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.418910Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.421125Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.422108Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T20:51:59.422361Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.424987Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T20:51:59.486906Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.488008Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.490909Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T20:51:59.552333Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.553440Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.556322Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T20:51:59.617812Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.618898Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.621974Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:59.683267Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.684346Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.687222Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T20:51:59.798799Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.799944Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.802958Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T20:51:59.914657Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.915740Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.918609Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T20:51:59.981704Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.982824Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.986281Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T20:52:00.047440Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.048510Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.051362Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T20:52:00.112795Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.113848Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.116853Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:52:00.179893Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.180907Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.183983Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T20:52:00.295541Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.296590Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.299383Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T20:52:00.360862Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.361922Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.365323Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T20:52:00.526765Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.527752Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.530569Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T20:52:00.592316Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.593346Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.595976Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T20:52:00.657988Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.659027Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.661778Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:52:00.723627Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.723733Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.724664Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.726418Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.727204Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T20:52:00.729475Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T20:52:00.758873Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.759856Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.762400Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:52:00.823995Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.824095Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.824994Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.825348Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.828365Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T20:52:00.829470Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T20:52:00.857716Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.857806Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.858681Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.859008Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.861784Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T20:52:00.862981Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:52:00.891288Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.892206Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.894824Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:52:00.924387Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.924497Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.925373Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.925937Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.929214Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:52:00.930334Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T20:52:00.990421Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.990535Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.991400Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.991974Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.995284Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T20:52:00.995991Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:52:01.025447Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.025557Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.026385Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.027003Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.030219Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T20:52:01.031031Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T20:52:01.061248Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.062154Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.064859Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T20:52:01.094379Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.095242Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.097965Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:52:01.127489Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.128382Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.131370Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T20:52:01.293082Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.294002Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.297204Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T20:52:01.509172Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.510098Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.512941Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T20:52:01.518070Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.518842Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.521136Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T20:52:01.550801Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.550892Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.551627Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.552223Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.554885Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T20:52:01.555976Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T20:52:01.584638Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.584731Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.585465Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.585726Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.588479Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T20:52:01.589224Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:52:01.601727Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.602460Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.604927Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T20:52:01.618511Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.618594Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.619267Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.619920Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.622682Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T20:52:01.623870Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T20:52:01.637220Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.637937Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.640565Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T20:52:01.702038Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.702133Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.702854Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.703498Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.706370Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:52:01.706930Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T20:52:01.737796Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.738487Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.741011Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T20:52:01.770491Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.770590Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.771239Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.771793Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.774750Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T20:52:01.775835Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:52:01.837751Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.837860Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.838527Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.838795Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.841715Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T20:52:01.842579Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:52:01.871956Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.873215Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.873839Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.875815Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.876258Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:52:01.878233Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:52:01.892165Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.892759Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.895633Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:52:01.924811Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.925435Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.927892Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T20:52:01.929059Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.929618Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.932406Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:52:01.961684Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.962311Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.964760Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:52:01.994141Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.994754Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.997242Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T20:52:02.026618Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.027530Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.027993Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.030060Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.031449Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:52:02.032636Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T20:52:02.062144Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.062215Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.062750Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.063369Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.065879Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T20:52:02.066981Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:52:02.096650Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.097230Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.099991Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T20:52:02.105405Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.105936Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.108575Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T20:52:02.138311Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.138387Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.138898Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.140811Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.141571Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T20:52:02.143683Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T20:52:02.173105Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.173173Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.173666Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.174275Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.177046Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T20:52:02.177951Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T20:52:02.191319Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.191873Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.194487Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T20:52:02.207910Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.207986Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.208450Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.209042Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.211881Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T20:52:02.212942Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:52:02.225181Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.225685Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.228519Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T20:52:02.241815Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.242280Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.244676Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T20:52:02.259353Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.259855Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.262343Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T20:52:02.275931Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.690892Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.691433Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.693918Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T20:52:02.723457Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.937749Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.938204Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.940947Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T20:52:02.970321Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.084524Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.084971Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.087288Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T20:52:03.116996Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.181203Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.181663Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.184320Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T20:52:03.213834Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.478210Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.478280Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.478688Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.478996Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.481439Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T20:52:03.482533Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:52:03.511864Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.511925Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.876529Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.876964Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.879254Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T20:52:03.909068Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.909342Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.909464Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.910053Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.911567Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.912350Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:03.914788Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:03.915883Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:03.943988Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.944048Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.944070Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.944253Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.944561Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.946800Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:03.947898Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:03.976455Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.976518Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.976696Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.979027Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:04.008742Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:08.331092Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:16.603407Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:16.603407Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] 
[2026-06-05T20:52:16.603407Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:16.603473Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] 
[2026-06-05T20:52:16.603480Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:16.603487Z] [nf-3a12e1c546400917cb573dcfe2af9f16-231c2-92z7d] [589_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec