File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/11aa32b6573f36507cc0531e678f6f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cs3jlx8b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:58:31,378 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:58:32,720 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:58:33,004 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:58:34,733 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:58:35,002 - cnv_pipe.batch.run_model - INFO - Processing cluster 1611 with 197 probes
2026-06-05 20:58:35,612 - cnv_pipe.batch.run_model.cluster1611 - INFO - Child process started for cluster 1611 with 197 probes
2026-06-05 21:00:11,632 - cnv_pipe.batch.run_model.cluster1611 - INFO - Child process finished cluster 1611. Wrote cluster_1611_samples.csv and cluster_1611_params.csv
2026-06-05 21:00:11,633 - cnv_pipe.batch.run_model - INFO - Cluster 1611 finished in 96.63 seconds. Status: SUCCESS