mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-litq9gw6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:53:52,083 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:53:52,884 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:53:53,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:53:53,875 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:53:54,016 - cnv_pipe.batch.run_model - INFO - Processing cluster 43 with 158 probes
2026-06-05 20:53:54,380 - cnv_pipe.batch.run_model.cluster43 - INFO - Child process started for cluster 43 with 158 probes
2026-06-05 20:54:42,240 - cnv_pipe.batch.run_model.cluster43 - INFO - Child process finished cluster 43. Wrote cluster_43_samples.csv and cluster_43_params.csv
2026-06-05 20:54:42,241 - cnv_pipe.batch.run_model - INFO - Cluster 43 finished in 48.22 seconds. Status: SUCCESS