File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/a3968be747dcb4a6731cad95644c7b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0yysl173 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:29,176 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:30,058 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:30,234 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:31,250 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:31,414 - cnv_pipe.batch.run_model - INFO - Processing cluster 1245 with 198 probes
2026-06-05 20:57:31,794 - cnv_pipe.batch.run_model.cluster1245 - INFO - Child process started for cluster 1245 with 198 probes
2026-06-05 20:58:34,523 - cnv_pipe.batch.run_model.cluster1245 - INFO - Child process finished cluster 1245. Wrote cluster_1245_samples.csv and cluster_1245_params.csv
2026-06-05 20:58:34,525 - cnv_pipe.batch.run_model - INFO - Cluster 1245 finished in 63.11 seconds. Status: SUCCESS