mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nxkikgmi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:22,177 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:22,992 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:23,160 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:24,094 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:24,175 - cnv_pipe.batch.run_model - INFO - Processing cluster 579 with 199 probes
2026-06-05 20:55:24,633 - cnv_pipe.batch.run_model.cluster579 - INFO - Child process started for cluster 579 with 199 probes
2026-06-05 20:56:25,370 - cnv_pipe.batch.run_model.cluster579 - INFO - Child process finished cluster 579. Wrote cluster_579_samples.csv and cluster_579_params.csv
2026-06-05 20:56:25,371 - cnv_pipe.batch.run_model - INFO - Cluster 579 finished in 61.20 seconds. Status: SUCCESS