mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ifj4vfll because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:02,547 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:03,375 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:03,550 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:04,651 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:04,723 - cnv_pipe.batch.run_model - INFO - Processing cluster 459 with 158 probes
2026-06-05 20:55:05,118 - cnv_pipe.batch.run_model.cluster459 - INFO - Child process started for cluster 459 with 158 probes
2026-06-05 20:55:53,252 - cnv_pipe.batch.run_model.cluster459 - INFO - Child process finished cluster 459. Wrote cluster_459_samples.csv and cluster_459_params.csv
2026-06-05 20:55:53,253 - cnv_pipe.batch.run_model - INFO - Cluster 459 finished in 48.53 seconds. Status: SUCCESS