File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/37b1a6f18751ef1e2a52f4fd15f516/.command.log
Size
69.9 KB
Attempt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr10_74133927-74134264.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/37b1a6f18751ef1e2a52f4fd15f516/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr10_74133927-74134264.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/6364050760c5582cbdad0b85841682/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/6364050760c5582cbdad0b85841682/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/37b1a6f18751ef1e2a52f4fd15f516/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-05T20:51:56.253311Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:56.254047Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:56.254061Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:56.254066Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:56.254071Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXDk2IXh'
[2026-06-05T20:51:56.254076Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:56.254082Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:56.254086Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:56.254090Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:51:56.254094Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:56.254098Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:56.254102Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:56.254106Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:56.254110Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:56.254718Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:56.254789Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:56.260949Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:56.261738Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:56.261874Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:56.262017Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:56.262242Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.262922Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.263765Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.263943Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.264100Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.264479Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.264726Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.266896Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267044Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:56.267287Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267435Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267502Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267618Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267689Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.267803Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.268000Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.268344Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.268646Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.268997Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.269267Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.269840Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.269934Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270050Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270117Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270231Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270294Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270415Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270478Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270592Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270669Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270799Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.270935Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.271701Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272068Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272193Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272257Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272369Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272436Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272547Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272611Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272726Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272790Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272903Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.272966Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.273237Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.273608Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.273734Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.273864Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.273983Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274066Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274196Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274266Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274383Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274454Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274596Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.274820Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275429Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275497Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275607Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275673Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275785Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275847Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.275963Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276027Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276133Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276205Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276315Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276455Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.276807Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.277450Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.278026Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.278096Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.278317Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.278389Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.292783Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293081Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293168Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293387Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293461Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293553Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293618Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293733Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293807Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.293861Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:56.297138Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.297869Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.298208Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.298512Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.299355Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.299857Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.301797Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.303379Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:51:56.304313Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.304580Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-06-05T20:51:56.305294Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.309825Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-06-05T20:51:56.311512Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:56.313611Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:56.317100Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-06-05T20:51:56.317432Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-06-05T20:51:56.318132Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:56.422108Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.422173Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.422966Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.423583Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.427515Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-06-05T20:51:56.429112Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:56.538650Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.538735Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.539531Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.540157Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.543034Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-06-05T20:51:56.543871Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-06-05T20:51:57.356957Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.357854Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.361325Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:57.390552Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.391389Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.393930Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T20:51:57.424534Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.425306Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.428364Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-06-05T20:51:57.489789Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.490843Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.493928Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-06-05T20:51:57.655427Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.656673Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.659672Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-06-05T20:51:57.971432Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.972687Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.975735Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-06-05T20:51:58.036730Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.038482Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.038935Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.040036Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.042889Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:58.043972Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-06-05T20:51:58.104262Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.104352Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.104422Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.105640Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.106000Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.106239Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.110141Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T20:51:58.111614Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:58.112288Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T20:51:58.141593Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.143122Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.143697Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.146443Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.147048Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-06-05T20:51:58.149501Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-06-05T20:51:58.211288Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.212143Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.215319Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-06-05T20:51:58.276441Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.277285Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.280603Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-06-05T20:51:58.281382Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.282346Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.285570Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T20:51:58.314410Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.315481Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.318636Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-06-05T20:51:58.319320Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.320616Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.323402Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-06-05T20:51:58.485261Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.486090Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.489456Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:51:58.901268Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.902052Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.905287Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:59.016489Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.017243Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.020045Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:51:59.081501Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.082270Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.085062Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-06-05T20:51:59.146677Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.147437Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.150862Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-06-05T20:51:59.212057Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.212806Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.215939Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-06-05T20:51:59.244888Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.245607Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.248398Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-06-05T20:51:59.278762Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.279469Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.282290Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T20:51:59.311668Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.312397Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.315398Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-06-05T20:51:59.627432Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.628217Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.631314Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T20:51:59.692476Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.693225Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.696406Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:51:59.725736Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.726420Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.728978Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-06-05T20:51:59.742407Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.743039Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.746317Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T20:51:59.759201Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.759271Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.759859Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.760351Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.763711Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-06-05T20:51:59.764936Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-06-05T20:51:59.776686Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.777306Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.780507Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-06-05T20:51:59.793427Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.794057Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.797035Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:51:59.858273Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.858943Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.861614Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T20:51:59.922864Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.923476Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.926444Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-06-05T20:51:59.988065Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.988757Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.991247Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-06-05T20:52:00.020846Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.021501Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.024676Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-06-05T20:52:00.037499Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.038090Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.040746Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-06-05T20:52:00.070102Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.070681Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.073612Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:52:00.234998Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.235745Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.239541Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-06-05T20:52:00.301336Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.301976Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.304663Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-06-05T20:52:00.334055Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.334624Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.337668Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-06-05T20:52:00.549277Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.550178Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.553725Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-06-05T20:52:00.815149Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.815781Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.818625Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-06-05T20:52:00.880103Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.880687Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.883092Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-06-05T20:52:00.912760Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.913272Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.915758Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-06-05T20:52:00.977579Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.978103Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.981197Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-06-05T20:52:01.042766Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.043339Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.046529Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T20:52:01.075677Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.076179Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.079155Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-06-05T20:52:01.140259Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.140313Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.140758Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.141039Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.144258Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T20:52:01.144948Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-06-05T20:52:01.204980Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.205460Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.208383Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T20:52:01.209230Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.209659Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.212020Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T20:52:01.242679Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.242746Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.457190Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.457733Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.460767Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-06-05T20:52:01.489927Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.490006Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.490484Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.492892Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-06-05T20:52:01.522477Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.522544Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.522976Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.525341Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-06-05T20:52:01.554704Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.969253Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.969687Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.972393Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-06-05T20:52:02.001990Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.216325Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.216767Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.219557Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-06-05T20:52:02.250136Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.714782Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.715243Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.718264Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-06-05T20:52:02.747588Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.747861Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.747997Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.748281Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.748471Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.752072Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:02.753646Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:02.754838Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:02.780773Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.780841Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.780864Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.781074Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.781582Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.784141Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:02.785202Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:02.815449Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.815505Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.815683Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.818224Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:02.847734Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:06.818792Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:15.142403Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:15.142403Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] 
[2026-06-05T20:52:15.142403Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:15.142458Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] 
[2026-06-05T20:52:15.142469Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:15.142477Z] [nf-2037b1a6f18751ef1e2a52f4fd15f516-2371a-lxqcs] [586_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec