File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/70e1dabef57eca4b7f8556f5601bbb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hx5nj267 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:02,820 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:03,624 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:03,786 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:04,852 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:05,057 - cnv_pipe.batch.run_model - INFO - Processing cluster 1114 with 178 probes
2026-06-05 20:57:05,429 - cnv_pipe.batch.run_model.cluster1114 - INFO - Child process started for cluster 1114 with 178 probes
2026-06-05 20:57:59,853 - cnv_pipe.batch.run_model.cluster1114 - INFO - Child process finished cluster 1114. Wrote cluster_1114_samples.csv and cluster_1114_params.csv
2026-06-05 20:57:59,854 - cnv_pipe.batch.run_model - INFO - Cluster 1114 finished in 54.80 seconds. Status: SUCCESS