cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.5s, peak mem 102MB, user 0.1s, sys 0.5s, output queue size 1
progress 10% @chr2:98000001, elapsed 0.1s, est remaining 0.6s, peak mem 102MB, user 0.1s, sys 1.6s, output queue size 12
progress 15% @chr3:14000001, elapsed 0.1s, est remaining 0.8s, peak mem 102MB, user 0.2s, sys 3.6s, output queue size 30
progress 20% @chr3:142000001, elapsed 0.2s, est remaining 0.8s, peak mem 102MB, user 0.3s, sys 5.5s, output queue size 25
progress 25% @chr4:136000001, elapsed 0.3s, est remaining 0.8s, peak mem 102MB, user 0.4s, sys 7.4s, output queue size 23
progress 30% @chr5:104000001, elapsed 0.3s, est remaining 0.8s, peak mem 102MB, user 0.5s, sys 9.4s, output queue size 10
progress 35% @chr6:40000001, elapsed 0.4s, est remaining 0.7s, peak mem 102MB, user 0.6s, sys 11.3s, output queue size 25
progress 40% @chr7:45000001, elapsed 0.5s, est remaining 0.7s, peak mem 102MB, user 0.7s, sys 13.0s, output queue size 13
progress 45% @chr8:45000001, elapsed 0.5s, est remaining 0.6s, peak mem 102MB, user 0.7s, sys 15.0s, output queue size 12
progress 50% @chr9:68000001, elapsed 0.6s, est remaining 0.6s, peak mem 102MB, user 0.8s, sys 16.9s, output queue size 14
progress 55% @chr10:91000001, elapsed 0.7s, est remaining 0.5s, peak mem 102MB, user 0.9s, sys 18.7s, output queue size 15
progress 60% @chr12:9000001, elapsed 0.7s, est remaining 0.5s, peak mem 102MB, user 1.0s, sys 20.5s, output queue size 13
progress 65% @chr13:6000001, elapsed 0.8s, est remaining 0.4s, peak mem 102MB, user 1.1s, sys 22.4s, output queue size 10
progress 70% @chr14:51000001, elapsed 0.8s, est remaining 0.4s, peak mem 102MB, user 1.1s, sys 24.3s, output queue size 14
progress 75% @chr15:96000001, elapsed 0.9s, est remaining 0.3s, peak mem 102MB, user 1.2s, sys 26.0s, output queue size 19
progress 80% @chr17:66000001, elapsed 1.0s, est remaining 0.2s, peak mem 102MB, user 1.3s, sys 27.9s, output queue size 18
progress 85% @chr20:13000001, elapsed 1.0s, est remaining 0.2s, peak mem 102MB, user 1.5s, sys 29.6s, output queue size 14
progress 90% @chrX:43000001, elapsed 1.1s, est remaining 0.1s, peak mem 111MB, user 1.9s, sys 30.8s, output queue size 114
progress 95% @chrY:25000001, elapsed 1.2s, est remaining 0.1s, peak mem 123MB, user 2.3s, sys 32.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.5s, est remaining 0.0s, peak mem 153MB, user 3.2s, sys 35.7s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813905
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.194 user 18.621 sys 19.957 real
done: 1 calls 0.000 user 0.001 sys 0.003 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.001 sys 1.532 real
idle: 83 calls 0.004 user 0.021 sys 38.305 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 160538624 mem 3.417 user 36.282 sys 2.691 real