mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u9liop0c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:46,188 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:47,061 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:47,234 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:48,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:48,433 - cnv_pipe.batch.run_model - INFO - Processing cluster 545 with 188 probes
2026-06-05 20:55:48,827 - cnv_pipe.batch.run_model.cluster545 - INFO - Child process started for cluster 545 with 188 probes
2026-06-05 20:56:46,997 - cnv_pipe.batch.run_model.cluster545 - INFO - Child process finished cluster 545. Wrote cluster_545_samples.csv and cluster_545_params.csv
2026-06-05 20:56:46,999 - cnv_pipe.batch.run_model - INFO - Cluster 545 finished in 58.57 seconds. Status: SUCCESS