cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:140000001, elapsed 0.0s, est remaining 0.5s, peak mem 115MB, user 0.1s, sys 0.4s, output queue size 35
progress 10% @chr2:78000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.1s, sys 1.0s, output queue size 10
progress 15% @chr2:240000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 1.6s, output queue size 33
progress 20% @chr3:155000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.3s, sys 2.3s, output queue size 14
progress 25% @chr4:118000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.5s, sys 2.8s, output queue size 14
progress 30% @chr5:91000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.6s, sys 3.4s, output queue size 38
progress 35% @chr6:70000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.8s, sys 4.0s, output queue size 17
progress 40% @chr7:61000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.9s, sys 4.5s, output queue size 27
progress 45% @chr8:18000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.9s, sys 5.2s, output queue size 39
progress 50% @chr9:49000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.0s, sys 5.9s, output queue size 24
progress 55% @chr10:98000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 1.1s, sys 6.5s, output queue size 19
progress 60% @chr11:121000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 1.1s, sys 7.0s, output queue size 19
progress 65% @chr13:14000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 1.2s, sys 7.5s, output queue size 3
progress 70% @chr14:63000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.3s, sys 8.1s, output queue size 5
progress 75% @chr16:3000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.3s, sys 8.7s, output queue size 13
progress 80% @chr18:3000001, elapsed 0.4s, est remaining 0.1s, peak mem 115MB, user 1.4s, sys 9.4s, output queue size 18
progress 85% @chr19:55000001, elapsed 0.4s, est remaining 0.1s, peak mem 115MB, user 1.4s, sys 10.0s, output queue size 29
progress 90% @chrX:38000001, elapsed 0.4s, est remaining 0.0s, peak mem 146MB, user 1.8s, sys 10.3s, output queue size 114
progress 95% @chrY:29000001, elapsed 0.5s, est remaining 0.0s, peak mem 158MB, user 2.2s, sys 10.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.0s, est remaining 0.0s, peak mem 185MB, user 3.8s, sys 11.5s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813905
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.209 user 5.721 sys 7.442 real
done: 1 calls 0.000 user 0.000 sys 0.007 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.003 sys 0.955 real
idle: 75 calls 0.009 user 0.018 sys 44.174 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 194691072 mem 4.177 user 12.254 sys 2.433 real