File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/a7e1044a797d352219db7c923eabf3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tot86hdb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:35,708 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:36,609 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:36,800 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:37,917 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:38,131 - cnv_pipe.batch.run_model - INFO - Processing cluster 1144 with 194 probes
2026-06-05 20:57:38,516 - cnv_pipe.batch.run_model.cluster1144 - INFO - Child process started for cluster 1144 with 194 probes
2026-06-05 20:58:39,180 - cnv_pipe.batch.run_model.cluster1144 - INFO - Child process finished cluster 1144. Wrote cluster_1144_samples.csv and cluster_1144_params.csv
2026-06-05 20:58:39,181 - cnv_pipe.batch.run_model - INFO - Cluster 1144 finished in 61.05 seconds. Status: SUCCESS