mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nk2umwho because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:49,819 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:50,736 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:50,911 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:51,941 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:52,120 - cnv_pipe.batch.run_model - INFO - Processing cluster 1274 with 187 probes
2026-06-05 20:57:52,535 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process started for cluster 1274 with 187 probes
2026-06-05 20:58:51,670 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process finished cluster 1274. Wrote cluster_1274_samples.csv and cluster_1274_params.csv
2026-06-05 20:58:51,671 - cnv_pipe.batch.run_model - INFO - Cluster 1274 finished in 59.55 seconds. Status: SUCCESS