mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-horoxkcf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:35,918 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:36,752 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:36,924 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:37,871 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:38,039 - cnv_pipe.batch.run_model - INFO - Processing cluster 662 with 183 probes
2026-06-05 20:55:38,416 - cnv_pipe.batch.run_model.cluster662 - INFO - Child process started for cluster 662 with 183 probes
2026-06-05 20:56:32,768 - cnv_pipe.batch.run_model.cluster662 - INFO - Child process finished cluster 662. Wrote cluster_662_samples.csv and cluster_662_params.csv
2026-06-05 20:56:32,769 - cnv_pipe.batch.run_model - INFO - Cluster 662 finished in 54.73 seconds. Status: SUCCESS