mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i9ireuhm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:53:57,998 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:53:58,808 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:53:59,020 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:53:59,987 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:54:00,181 - cnv_pipe.batch.run_model - INFO - Processing cluster 78 with 195 probes
2026-06-05 20:54:00,574 - cnv_pipe.batch.run_model.cluster78 - INFO - Child process started for cluster 78 with 195 probes
2026-06-05 20:54:59,514 - cnv_pipe.batch.run_model.cluster78 - INFO - Child process finished cluster 78. Wrote cluster_78_samples.csv and cluster_78_params.csv
2026-06-05 20:54:59,515 - cnv_pipe.batch.run_model - INFO - Cluster 78 finished in 59.33 seconds. Status: SUCCESS