mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ypt4cvd1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:54:55,381 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:54:56,192 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:54:56,352 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:54:57,269 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:54:57,421 - cnv_pipe.batch.run_model - INFO - Processing cluster 417 with 191 probes
2026-06-05 20:54:57,801 - cnv_pipe.batch.run_model.cluster417 - INFO - Child process started for cluster 417 with 191 probes
2026-06-05 20:55:55,891 - cnv_pipe.batch.run_model.cluster417 - INFO - Child process finished cluster 417. Wrote cluster_417_samples.csv and cluster_417_params.csv
2026-06-05 20:55:55,892 - cnv_pipe.batch.run_model - INFO - Cluster 417 finished in 58.47 seconds. Status: SUCCESS