File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/2cefbe25efd08c12f37d8e0bbd46c9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2hcz785v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:26,010 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:26,789 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:26,955 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:27,888 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:28,041 - cnv_pipe.batch.run_model - INFO - Processing cluster 1316 with 199 probes
2026-06-05 20:57:28,411 - cnv_pipe.batch.run_model.cluster1316 - INFO - Child process started for cluster 1316 with 199 probes
2026-06-05 20:58:26,976 - cnv_pipe.batch.run_model.cluster1316 - INFO - Child process finished cluster 1316. Wrote cluster_1316_samples.csv and cluster_1316_params.csv
2026-06-05 20:58:26,977 - cnv_pipe.batch.run_model - INFO - Cluster 1316 finished in 58.94 seconds. Status: SUCCESS