mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gb77vhnf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:23,234 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:24,064 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:24,230 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:56:25,188 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:56:25,273 - cnv_pipe.batch.run_model - INFO - Processing cluster 937 with 196 probes
2026-06-05 20:56:25,747 - cnv_pipe.batch.run_model.cluster937 - INFO - Child process started for cluster 937 with 196 probes
2026-06-05 20:57:25,560 - cnv_pipe.batch.run_model.cluster937 - INFO - Child process finished cluster 937. Wrote cluster_937_samples.csv and cluster_937_params.csv
2026-06-05 20:57:25,561 - cnv_pipe.batch.run_model - INFO - Cluster 937 finished in 60.29 seconds. Status: SUCCESS