[2026-06-05T20:51:56.462121Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T20:51:56.464114Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T20:51:56.464133Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T20:51:56.464138Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T20:51:56.464142Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXqM2mmo'
[2026-06-05T20:51:56.464146Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T20:51:56.464151Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T20:51:56.464155Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T20:51:56.464158Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T20:51:56.464162Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T20:51:56.464166Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T20:51:56.464169Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T20:51:56.464172Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T20:51:56.464176Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T20:51:56.464804Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T20:51:56.464888Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T20:51:56.470431Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T20:51:56.471049Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T20:51:56.471293Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T20:51:56.472240Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T20:51:56.472373Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.472861Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.472955Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.473026Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.473159Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.473280Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.473654Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.473966Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.474212Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.474361Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.474511Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.474910Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.475358Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.475636Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.475786Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.477789Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.477943Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T20:51:56.478119Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478265Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478330Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478532Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478613Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478749Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.478998Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.479501Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.479809Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.479934Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.479999Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480108Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480172Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480281Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480349Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480470Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480532Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480679Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.480748Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481224Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481526Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481645Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481711Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481822Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481883Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.481993Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482055Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482161Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482222Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482333Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482396Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.482831Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483227Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483342Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483408Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483515Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483577Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483689Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483749Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483858Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.483924Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484027Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484091Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484369Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484850Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.484992Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.485056Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.485163Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.485232Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.485342Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.485402Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.486253Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487073Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487276Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487358Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487482Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.487548Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.489472Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490151Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490303Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490373Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490487Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490552Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490666Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490728Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490841Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.490903Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.491013Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.491079Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.491363Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492013Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492131Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492196Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492307Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492368Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492472Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492532Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492641Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492702Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492817Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.492878Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.505983Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506108Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506188Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506501Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506571Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506671Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506737Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506868Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506942Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T20:51:56.506993Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T20:51:56.510723Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.511597Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.511871Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.512267Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.512596Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.513083Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.513917Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.515858Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.516613Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T20:51:56.516828Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.522299Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T20:51:56.524230Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T20:51:56.525256Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T20:51:56.528725Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T20:51:56.531354Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T20:51:56.532593Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T20:51:56.534598Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T20:51:56.587356Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.588310Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.590770Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T20:51:56.596116Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.596176Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.597001Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.597483Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.601296Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T20:51:56.601740Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.601805Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.602019Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T20:51:56.602870Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.603204Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.606788Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T20:51:56.607547Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T20:51:56.717763Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.718660Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.720947Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T20:51:56.750690Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.751509Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:56.753971Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T20:51:57.266670Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.267793Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.270801Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T20:51:57.283722Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.284642Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.287678Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T20:51:57.300774Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.301731Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.304770Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T20:51:57.366112Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.367149Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.370027Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T20:51:57.399152Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.400125Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.402870Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T20:51:57.464514Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.466094Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.469287Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T20:51:57.680750Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.681737Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.685013Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T20:51:57.846209Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.847301Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.850296Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T20:51:57.881120Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.882105Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.885155Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T20:51:57.946350Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.947437Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:57.950672Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T20:51:58.111946Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.112991Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.115632Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T20:51:58.146431Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.147386Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.150124Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T20:51:58.163267Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.164199Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.167041Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T20:51:58.428705Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.428800Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.429725Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.430211Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.433785Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T20:51:58.434993Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T20:51:58.494702Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.494800Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.495798Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.496439Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.499491Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T20:51:58.500499Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T20:51:58.528591Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.529439Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.532089Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T20:51:58.593516Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.593578Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.594452Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.594840Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.598075Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T20:51:58.599277Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T20:51:58.629962Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.630054Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.630928Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.631417Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.634585Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T20:51:58.635880Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T20:51:58.696015Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.696893Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:58.700101Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T20:51:59.663371Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.664309Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.667568Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T20:51:59.728805Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.728883Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.729773Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.730603Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.733775Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T20:51:59.734881Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T20:51:59.797007Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.797112Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.797968Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.798560Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.801953Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T20:51:59.803225Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T20:51:59.863142Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.863229Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.864112Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.864702Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.867975Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T20:51:59.869227Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T20:51:59.899901Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.899984Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.900825Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.901381Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.904881Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T20:51:59.906089Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T20:51:59.919465Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.920327Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.923190Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T20:51:59.984920Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.985899Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:51:59.989421Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T20:52:00.350981Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.351840Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.354503Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T20:52:00.416123Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.416954Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.419688Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T20:52:00.449069Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.449858Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.452995Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T20:52:00.514330Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.515143Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.517824Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T20:52:00.546969Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.548296Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.551031Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T20:52:00.580215Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.581808Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.582308Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.585203Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.586164Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T20:52:00.589253Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T20:52:00.649419Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.650647Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.654191Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T20:52:00.815317Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.816631Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.819787Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T20:52:00.880941Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.882310Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.885313Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T20:52:00.946411Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.946505Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.947603Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.947968Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:00.951538Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T20:52:00.953027Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T20:52:01.012408Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.012508Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.013521Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.013939Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.017785Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T20:52:01.074369Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T20:52:01.077984Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.079081Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.081959Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T20:52:01.143114Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.144462Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.147831Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T20:52:01.309215Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.310294Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.314196Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T20:52:01.326261Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.327207Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.330377Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T20:52:01.359236Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.360218Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.363465Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T20:52:01.364170Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.365289Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.368702Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:01.529640Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.530560Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.533622Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T20:52:01.594789Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.596130Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.599636Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T20:52:01.660532Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.661753Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.665184Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T20:52:01.776337Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.777313Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.780521Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T20:52:01.891681Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.892635Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.895943Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T20:52:01.956817Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.957830Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:01.961783Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T20:52:02.573407Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.573487Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.574133Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.576201Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.578492Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T20:52:02.579520Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T20:52:02.609222Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.609874Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.612498Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T20:52:02.613641Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.614177Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.616884Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T20:52:02.646373Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.646982Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.649569Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T20:52:02.680304Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.680919Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.683761Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T20:52:02.795498Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.796169Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.799573Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T20:52:02.860704Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.861337Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.864920Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T20:52:02.926158Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.926233Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.926840Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.928712Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.930568Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T20:52:02.931491Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T20:52:02.962515Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.962616Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.963219Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.963760Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:02.968118Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:02.968880Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T20:52:02.999745Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.000339Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.003427Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T20:52:03.016414Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.016975Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.020021Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T20:52:03.049089Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.049718Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.052820Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T20:52:03.057893Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.122144Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.122717Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.125933Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T20:52:03.156168Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.320629Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.321177Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.323996Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T20:52:03.385661Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.750798Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.751335Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.754153Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T20:52:03.816902Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.816976Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.817477Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T20:52:03.820134Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T20:52:03.849495Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.364599Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.365150Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.367725Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T20:52:04.397209Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.962368Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.962903Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T20:52:04.965553Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T20:52:04.994981Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.316309Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.316806Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.319400Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T20:52:09.348851Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.349104Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.349210Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.349812Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.350248Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.351938Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T20:52:09.354163Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T20:52:09.355195Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T20:52:09.383467Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.383520Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.383541Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.383712Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.384043Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.386386Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T20:52:09.411833Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T20:52:09.416246Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.416298Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.416451Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T20:52:09.418557Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T20:52:09.448516Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T20:52:15.414543Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T20:52:29.551376Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T20:52:29.551376Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] 
[2026-06-05T20:52:29.551376Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T20:52:29.551435Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] 
[2026-06-05T20:52:29.551441Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T20:52:29.551448Z] [nf-9c9a37cbdce7a2954de9b0a99cb6c5ba-d3a26-vtnjn] [578_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec