mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-07x9qxor because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:54:04,777 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:54:05,570 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:54:05,733 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:54:06,706 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:54:06,788 - cnv_pipe.batch.run_model - INFO - Processing cluster 117 with 195 probes
2026-06-05 20:54:07,180 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process started for cluster 117 with 195 probes
2026-06-05 20:55:02,637 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process finished cluster 117. Wrote cluster_117_samples.csv and cluster_117_params.csv
2026-06-05 20:55:02,639 - cnv_pipe.batch.run_model - INFO - Cluster 117 finished in 55.85 seconds. Status: SUCCESS