File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/7a0f347bc45a299a843829ada59583/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-suws043o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:01,787 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:02,583 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:02,748 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:03,767 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:03,922 - cnv_pipe.batch.run_model - INFO - Processing cluster 1167 with 189 probes
2026-06-05 20:57:04,322 - cnv_pipe.batch.run_model.cluster1167 - INFO - Child process started for cluster 1167 with 189 probes
2026-06-05 20:58:00,654 - cnv_pipe.batch.run_model.cluster1167 - INFO - Child process finished cluster 1167. Wrote cluster_1167_samples.csv and cluster_1167_params.csv
2026-06-05 20:58:00,655 - cnv_pipe.batch.run_model - INFO - Cluster 1167 finished in 56.73 seconds. Status: SUCCESS