File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/6c2b1925850bea2dac9114eb0a7c01/.command.log
Size
3.8 KB
Task
DAQ:FLOWCELL_QC (REGRESSION)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/9bf1e1d98e7cd68376b1a0d917c1ea/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/77ee108f9cacfe9471fc69dfeb8115/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/3115dfa7b33268f37615505d49a5f5/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/3115dfa7b33268f37615505d49a5f5/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/60df0349f2789a296cefc5427e9fee/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/6c2b1925850bea2dac9114eb0a7c01/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/9bf1e1d98e7cd68376b1a0d917c1ea/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/3115dfa7b33268f37615505d49a5f5/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/550ba8797d52ee10a0f8835172e517/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/98a407937b746d451937763b5e931e/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/77ee108f9cacfe9471fc69dfeb8115/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_daq/e2e_regression_bcl/rundir/InterOp/TileMetricsOut.bin
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/550ba8797d52ee10a0f8835172e517/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/75be7f09ae2a9c3b74b9f3f30bc23d/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/75be7f09ae2a9c3b74b9f3f30bc23d/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/77ee108f9cacfe9471fc69dfeb8115/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/75be7f09ae2a9c3b74b9f3f30bc23d/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/60df0349f2789a296cefc5427e9fee/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/9bf1e1d98e7cd68376b1a0d917c1ea/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/621fe2a95be7388354d0dd74a1a17d/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/621fe2a95be7388354d0dd74a1a17d/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/98a407937b746d451937763b5e931e/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/98a407937b746d451937763b5e931e/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/550ba8797d52ee10a0f8835172e517/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/621fe2a95be7388354d0dd74a1a17d/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/6c2b1925850bea2dac9114eb0a7c01/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_daq/e2e_regression_bcl/rundir/RunInfo.xml
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/60df0349f2789a296cefc5427e9fee/output/Reports/Index_Hopping_Counts.csv
==> STAGING COMPLETE (28 inputs)

INFO: InterOp files not provided, InterOp metrics will be null
Wrote flowcell_qc.csv with 7/13 metrics populated