File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/810c058c637098257f8d587ae5acb7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7t6slbua because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:56:58,506 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:56:59,471 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:56:59,671 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:00,774 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:00,933 - cnv_pipe.batch.run_model - INFO - Processing cluster 1140 with 191 probes
2026-06-05 20:57:01,391 - cnv_pipe.batch.run_model.cluster1140 - INFO - Child process started for cluster 1140 with 191 probes
2026-06-05 20:58:07,860 - cnv_pipe.batch.run_model.cluster1140 - INFO - Child process finished cluster 1140. Wrote cluster_1140_samples.csv and cluster_1140_params.csv
2026-06-05 20:58:07,861 - cnv_pipe.batch.run_model - INFO - Cluster 1140 finished in 66.93 seconds. Status: SUCCESS