mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wx2i98ih because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:21,695 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:22,552 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:22,717 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:23,721 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:23,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 573 with 187 probes
2026-06-05 20:55:24,200 - cnv_pipe.batch.run_model.cluster573 - INFO - Child process started for cluster 573 with 187 probes
2026-06-05 20:56:20,725 - cnv_pipe.batch.run_model.cluster573 - INFO - Child process finished cluster 573. Wrote cluster_573_samples.csv and cluster_573_params.csv
2026-06-05 20:56:20,726 - cnv_pipe.batch.run_model - INFO - Cluster 573 finished in 56.92 seconds. Status: SUCCESS