File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/d105f14eea7ede66026c8ff7d9153c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-udw8j38b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:58:01,247 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:58:02,099 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:58:02,284 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:58:03,310 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:58:03,382 - cnv_pipe.batch.run_model - INFO - Processing cluster 1283 with 173 probes
2026-06-05 20:58:03,864 - cnv_pipe.batch.run_model.cluster1283 - INFO - Child process started for cluster 1283 with 173 probes
2026-06-05 20:58:57,096 - cnv_pipe.batch.run_model.cluster1283 - INFO - Child process finished cluster 1283. Wrote cluster_1283_samples.csv and cluster_1283_params.csv
2026-06-05 20:58:57,098 - cnv_pipe.batch.run_model - INFO - Cluster 1283 finished in 53.72 seconds. Status: SUCCESS