File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/b0a10f8755a8d1e5bf83136c94e293/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-epe042th because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:58:21,331 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:58:22,293 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:58:22,487 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:58:23,645 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:58:23,802 - cnv_pipe.batch.run_model - INFO - Processing cluster 1640 with 62 probes
2026-06-05 20:58:24,251 - cnv_pipe.batch.run_model.cluster1640 - INFO - Child process started for cluster 1640 with 62 probes
2026-06-05 20:58:51,298 - cnv_pipe.batch.run_model.cluster1640 - INFO - Child process finished cluster 1640. Wrote cluster_1640_samples.csv and cluster_1640_params.csv
2026-06-05 20:58:51,298 - cnv_pipe.batch.run_model - INFO - Cluster 1640 finished in 27.50 seconds. Status: SUCCESS