File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/afb7a975081a9cd035ca8470ec9aa6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-auwtr30b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:57:54,278 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:57:55,106 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:57:55,280 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:57:56,205 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:57:56,382 - cnv_pipe.batch.run_model - INFO - Processing cluster 1487 with 186 probes
2026-06-05 20:57:56,765 - cnv_pipe.batch.run_model.cluster1487 - INFO - Child process started for cluster 1487 with 186 probes
2026-06-05 20:58:52,965 - cnv_pipe.batch.run_model.cluster1487 - INFO - Child process finished cluster 1487. Wrote cluster_1487_samples.csv and cluster_1487_params.csv
2026-06-05 20:58:52,966 - cnv_pipe.batch.run_model - INFO - Cluster 1487 finished in 56.58 seconds. Status: SUCCESS