File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/4af8975f97b77d8e8df60117b7054f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d09ka8k0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:04,321 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:05,245 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:05,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:06,440 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:06,599 - cnv_pipe.batch.run_model - INFO - Processing cluster 466 with 196 probes
2026-06-05 20:55:06,977 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process started for cluster 466 with 196 probes
2026-06-05 20:56:09,005 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process finished cluster 466. Wrote cluster_466_samples.csv and cluster_466_params.csv
2026-06-05 20:56:09,007 - cnv_pipe.batch.run_model - INFO - Cluster 466 finished in 62.41 seconds. Status: SUCCESS