mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-b5vuus_d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:53:56,436 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:53:57,268 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:53:57,433 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:53:58,358 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:53:58,511 - cnv_pipe.batch.run_model - INFO - Processing cluster 68 with 184 probes
2026-06-05 20:53:58,890 - cnv_pipe.batch.run_model.cluster68 - INFO - Child process started for cluster 68 with 184 probes
2026-06-05 20:54:53,578 - cnv_pipe.batch.run_model.cluster68 - INFO - Child process finished cluster 68. Wrote cluster_68_samples.csv and cluster_68_params.csv
2026-06-05 20:54:53,579 - cnv_pipe.batch.run_model - INFO - Cluster 68 finished in 55.07 seconds. Status: SUCCESS