File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/b03f9e6cef46bac4fac989c2b3dc3c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ziq7ttye because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:58:15,788 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:58:16,572 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:58:16,731 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:58:17,729 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:58:17,908 - cnv_pipe.batch.run_model - INFO - Processing cluster 1571 with 195 probes
2026-06-05 20:58:18,273 - cnv_pipe.batch.run_model.cluster1571 - INFO - Child process started for cluster 1571 with 195 probes
2026-06-05 20:59:16,455 - cnv_pipe.batch.run_model.cluster1571 - INFO - Child process finished cluster 1571. Wrote cluster_1571_samples.csv and cluster_1571_params.csv
2026-06-05 20:59:16,456 - cnv_pipe.batch.run_model - INFO - Cluster 1571 finished in 58.55 seconds. Status: SUCCESS