mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t2cfyph6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:05,421 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:06,226 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:06,387 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:07,338 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:07,501 - cnv_pipe.batch.run_model - INFO - Processing cluster 476 with 193 probes
2026-06-05 20:55:07,896 - cnv_pipe.batch.run_model.cluster476 - INFO - Child process started for cluster 476 with 193 probes
2026-06-05 20:56:06,536 - cnv_pipe.batch.run_model.cluster476 - INFO - Child process finished cluster 476. Wrote cluster_476_samples.csv and cluster_476_params.csv
2026-06-05 20:56:06,537 - cnv_pipe.batch.run_model - INFO - Cluster 476 finished in 59.04 seconds. Status: SUCCESS